STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A368PML7Protein kinase domain-containing protein. (705 aa)    
Predicted Functional Partners:
K3ZY22_SETIT
Transcription elongation factor SPT4 homolog; May regulate transcription elongation by RNA polymerase II. May enhance transcriptional pausing at sites proximal to the promoter, which may in turn facilitate the assembly of an elongation competent RNA polymerase II complex; Belongs to the SPT4 family.
    
 0.644
K4AIY6_SETIT
CYCLIN domain-containing protein; Belongs to the cyclin family.
    
 0.640
K3Z6H1_SETIT
Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.
  
 
0.576
A0A368PJD9
Uncharacterized protein; Belongs to the cyclin family.
    
 0.561
A0A368R600
Uncharacterized protein; Belongs to the cyclin family.
    
 0.561
A0A368RYH4
Uncharacterized protein; Belongs to the cyclin family.
    
 0.561
K3XWJ6_SETIT
Uncharacterized protein; Belongs to the cyclin family.
    
 0.561
K3Y5G7_SETIT
Uncharacterized protein; Belongs to the cyclin family.
    
 0.561
K3Y5Z7_SETIT
Uncharacterized protein; Belongs to the cyclin family.
    
 0.561
K3Z4R7_SETIT
Uncharacterized protein; Belongs to the cyclin family.
    
 0.561
Your Current Organism:
Setaria italica
NCBI taxonomy Id: 4555
Other names: Chaetochloa italica, Chaetochloa italica (L.) Scribn., Panicum italicum, Panicum italicum L., S. italica, Setaria italica (L.) P.Beauv., Setaria viridis subsp. italica, Setaria viridis subsp. italica (L.) Briq., foxtail millet
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.