Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
A0A368PPC7Uncharacterized protein. (249 aa)    
Predicted Functional Partners:
K3XSA9_SETIT
Uncharacterized protein; Belongs to the synaptobrevin family.
   
 0.950
K3XY82_SETIT
t-SNARE coiled-coil homology domain-containing protein; Belongs to the syntaxin family.
    
 0.939
K4AED1_SETIT
Membrin; Involved in transport of proteins from the cis/medial-Golgi to the trans-Golgi network.
    
 0.939
K4A745_SETIT
Uncharacterized protein; Belongs to the STXBP/unc-18/SEC1 family.
    
 0.928
K3XLR3_SETIT
V-SNARE domain-containing protein.
   
 0.906
K3XLR5_SETIT
t-SNARE coiled-coil homology domain-containing protein.
   
 0.906
A0A368QDH0
t-SNARE coiled-coil homology domain-containing protein.
    
 0.904
K3XJG5_SETIT
t-SNARE coiled-coil homology domain-containing protein; Belongs to the syntaxin family.
    
 0.904
A0A368RZ47
Uncharacterized protein.
   
 0.903
K3Y7A1_SETIT
Uncharacterized protein.
   
 0.903
Your Current Organism:
Setaria italica
NCBI taxonomy Id: 4555
Other names: Chaetochloa italica, Chaetochloa italica (L.) Scribn., Panicum italicum, Panicum italicum L., S. italica, Setaria italica (L.) P.Beauv., Setaria viridis subsp. italica, Setaria viridis subsp. italica (L.) Briq., foxtail millet
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