A0A368PPL8 protein (Setaria italica) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

A0A368PPL8

Helicase C-terminal domain-containing protein. (1166 aa)

Predicted Functional Partners:

K3YSC4_SETIT

0.724

A0A368QTC9

0.714

K3XF17_SETIT

0.656

A0A368S7Y8

0.628

K3ZKA8_SETIT

0.628

K3XUK3_SETIT

0.595

K3YP42_SETIT

0.595

K3YV19_SETIT

0.574

K3ZDK0_SETIT

0.572

K4A5A6_SETIT

0.562

Your Current Organism:

Setaria italica

NCBI taxonomy Id: 4555
Other names: Chaetochloa italica, Chaetochloa italica (L.) Scribn., Panicum italicum, Panicum italicum L., S. italica, Setaria italica (L.) P.Beauv., Setaria viridis subsp. italica, Setaria viridis subsp. italica (L.) Briq., foxtail millet

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A0A368PPL8	A0A368QTC9	A0A368PPL8	A0A368QTC9	Helicase C-terminal domain-containing protein.	Uncharacterized protein.	0.714
A0A368PPL8	A0A368S7Y8	A0A368PPL8	A0A368S7Y8	Helicase C-terminal domain-containing protein.	Uncharacterized protein.	0.628
A0A368PPL8	K3XF17_SETIT	A0A368PPL8	K3XF17	Helicase C-terminal domain-containing protein.	Uncharacterized protein; Belongs to the actin family.	0.656
A0A368PPL8	K3XUK3_SETIT	A0A368PPL8	K3XUK3	Helicase C-terminal domain-containing protein.	Helicase ATP-binding domain-containing protein.	0.595
A0A368PPL8	K3YP42_SETIT	A0A368PPL8	K3YP42	Helicase C-terminal domain-containing protein.	Helicase ATP-binding domain-containing protein.	0.595
A0A368PPL8	K3YSC4_SETIT	A0A368PPL8	K3YSC4	Helicase C-terminal domain-containing protein.	Uncharacterized protein.	0.724
A0A368PPL8	K3YV19_SETIT	A0A368PPL8	K3YV19	Helicase C-terminal domain-containing protein.	Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.	0.574
A0A368PPL8	K3ZDK0_SETIT	A0A368PPL8	K3ZDK0	Helicase C-terminal domain-containing protein.	Uncharacterized protein.	0.572
A0A368PPL8	K3ZKA8_SETIT	A0A368PPL8	K3ZKA8	Helicase C-terminal domain-containing protein.	Uncharacterized protein.	0.628
A0A368PPL8	K4A5A6_SETIT	A0A368PPL8	K4A5A6	Helicase C-terminal domain-containing protein.	Uncharacterized protein.	0.562
A0A368QTC9	A0A368PPL8	A0A368QTC9	A0A368PPL8	Uncharacterized protein.	Helicase C-terminal domain-containing protein.	0.714
A0A368QTC9	K3XUK3_SETIT	A0A368QTC9	K3XUK3	Uncharacterized protein.	Helicase ATP-binding domain-containing protein.	0.665
A0A368QTC9	K3YP42_SETIT	A0A368QTC9	K3YP42	Uncharacterized protein.	Helicase ATP-binding domain-containing protein.	0.659
A0A368QTC9	K3YSC4_SETIT	A0A368QTC9	K3YSC4	Uncharacterized protein.	Uncharacterized protein.	0.952
A0A368QTC9	K4A5A6_SETIT	A0A368QTC9	K4A5A6	Uncharacterized protein.	Uncharacterized protein.	0.727
A0A368S7Y8	A0A368PPL8	A0A368S7Y8	A0A368PPL8	Uncharacterized protein.	Helicase C-terminal domain-containing protein.	0.628
A0A368S7Y8	K3XUK3_SETIT	A0A368S7Y8	K3XUK3	Uncharacterized protein.	Helicase ATP-binding domain-containing protein.	0.637
A0A368S7Y8	K3YP42_SETIT	A0A368S7Y8	K3YP42	Uncharacterized protein.	Helicase ATP-binding domain-containing protein.	0.637
A0A368S7Y8	K3YSC4_SETIT	A0A368S7Y8	K3YSC4	Uncharacterized protein.	Uncharacterized protein.	0.952
A0A368S7Y8	K4A5A6_SETIT	A0A368S7Y8	K4A5A6	Uncharacterized protein.	Uncharacterized protein.	0.653

page 1 of 4

Server load: low (24%) [HD]

Permalink

Network

Neighborhood

Experiments

Cooccurrence

Databases

Coexpression

Textmining

Fusion

© STRING Consortium 2025

Credits

Access

Info

About