close STRING v12.5 is now available!
The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A368PPR5Uncharacterized protein. (198 aa)    
Predicted Functional Partners:
A0A368SIQ3
Dof-type domain-containing protein.
  
     0.509
A0A368R917
Dof-type domain-containing protein.
  
     0.502
A0A368PRA8
Dof-type domain-containing protein.
  
     0.500
K3Z9N5_SETIT
Dof-type domain-containing protein.
  
    0.498
A0A368SE80
Dof-type domain-containing protein.
  
     0.497
K4ALA5_SETIT
Dof-type domain-containing protein.
  
     0.494
K3XK07_SETIT
Dof-type domain-containing protein.
  
     0.484
A0A368RB83
Dof-type domain-containing protein.
  
     0.482
K3Z7W3_SETIT
Dof-type domain-containing protein.
  
     0.482
K3Z813_SETIT
Dof-type domain-containing protein.
  
     0.478
Your Current Organism:
Setaria italica
NCBI taxonomy Id: 4555
Other names: Chaetochloa italica, Chaetochloa italica (L.) Scribn., Panicum italicum, Panicum italicum L., S. italica, Setaria italica (L.) P.Beauv., Setaria viridis subsp. italica, Setaria viridis subsp. italica (L.) Briq., foxtail millet
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.