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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A368PR83AAA domain-containing protein; Belongs to the AAA ATPase family. (595 aa)    
Predicted Functional Partners:
K3XI98_SETIT
MPN domain-containing protein.
   
 0.933
K3XYI9_SETIT
PRKCSH domain-containing protein.
    
 0.922
K3XJW0_SETIT
Josephin domain-containing protein.
    
 0.909
K4AF25_SETIT
Proteasome subunit beta; The proteasome is a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH; Belongs to the peptidase T1B family.
   
 0.894
K4AAQ1_SETIT
VWFA domain-containing protein.
   
 0.888
K4ABE4_SETIT
VWFA domain-containing protein.
   
 0.888
A0A368PHU6
Uncharacterized protein.
   
 0.870
K3YVE4_SETIT
OTU domain-containing protein.
   
 0.870
K3ZTA6_SETIT
AAA domain-containing protein; Belongs to the AAA ATPase family.
  
 
0.859
K4A9X8_SETIT
AAA domain-containing protein; Belongs to the AAA ATPase family.
  
 
0.858
Your Current Organism:
Setaria italica
NCBI taxonomy Id: 4555
Other names: Chaetochloa italica, Chaetochloa italica (L.) Scribn., Panicum italicum, Panicum italicum L., S. italica, Setaria italica (L.) P.Beauv., Setaria viridis subsp. italica, Setaria viridis subsp. italica (L.) Briq., foxtail millet
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