close STRING v12.5 is now available!
The next version of STRING is ready for use in your analyses: updated networks across STRING newly available directed regulatory networks a new typed view showing functional, physical, and regulatory edges in one network new clustering options and cluster-based layouts … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A368PRP0DIS3-like exonuclease 2; 3'-5'-exoribonuclease that specifically recognizes RNAs polyuridylated at their 3' end and mediates their degradation. Component of an exosome-independent RNA degradation pathway that mediates degradation of cytoplasmic mRNAs that have been deadenylated and subsequently uridylated at their 3'. (1065 aa)    
Predicted Functional Partners:
K3YVT9_SETIT
Uncharacterized protein.
   
 0.985
K3Y983_SETIT
Uncharacterized protein.
   
 0.984
K3ZJB9_SETIT
Uncharacterized protein.
   
 0.984
K3XLG8_SETIT
KH_dom_type_1 domain-containing protein.
   
 0.983
K3Y8S4_SETIT
S1 domain-containing protein.
   
 0.983
K4AED5_SETIT
RNase_PH domain-containing protein.
   
 0.983
A0A368PLY7
Uncharacterized protein.
   
 0.966
A0A368PNT8
Uncharacterized protein.
   
 0.966
K3YJQ1_SETIT
Uncharacterized protein.
   
 0.949
K3ZQF3_SETIT
HRDC domain-containing protein.
   
 0.942
Your Current Organism:
Setaria italica
NCBI taxonomy Id: 4555
Other names: Chaetochloa italica, Chaetochloa italica (L.) Scribn., Panicum italicum, Panicum italicum L., S. italica, Setaria italica (L.) P.Beauv., Setaria viridis subsp. italica, Setaria viridis subsp. italica (L.) Briq., foxtail millet
Server load: medium (52%) [HD]