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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A368PRV2Uncharacterized protein. (558 aa)    
Predicted Functional Partners:
K3ZJH2_SETIT
Chlorophyll a-b binding protein, chloroplastic; The light-harvesting complex (LHC) functions as a light receptor, it captures and delivers excitation energy to photosystems with which it is closely associated; Belongs to the light-harvesting chlorophyll a/b-binding (LHC) protein family.
   
   0.631
K3XJV1_SETIT
Uncharacterized protein.
    
 
 0.542
PsbF
Cytochrome b559 subunit beta; This b-type cytochrome is tightly associated with the reaction center of photosystem II (PSII). PSII is a light-driven water:plastoquinone oxidoreductase that uses light energy to abstract electrons from H(2)O, generating O(2) and a proton gradient subsequently used for ATP formation. It consists of a core antenna complex that captures photons, and an electron transfer chain that converts photonic excitation into a charge separation. Belongs to the PsbE/PsbF family.
    
   0.507
psbT
Photosystem II reaction center protein T; Seems to play a role in the dimerization of PSII. Belongs to the PsbT family.
    
   0.507
K3XYV6_SETIT
PsbP domain-containing protein.
    
 
 0.504
K3ZAJ9_SETIT
Uncharacterized protein.
   
 
 0.500
A0A368Q9D3
Uncharacterized protein.
  
 
   0.499
PsbJ
Uncharacterized protein.
    
   0.475
K3YAL8_SETIT
Uncharacterized protein.
    
   0.433
K3YIV0_SETIT
Uncharacterized protein.
  
     0.419
Your Current Organism:
Setaria italica
NCBI taxonomy Id: 4555
Other names: Chaetochloa italica, Chaetochloa italica (L.) Scribn., Panicum italicum, Panicum italicum L., S. italica, Setaria italica (L.) P.Beauv., Setaria viridis subsp. italica, Setaria viridis subsp. italica (L.) Briq., foxtail millet
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.