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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A368PTS2Remorin_C domain-containing protein. (158 aa)    
Predicted Functional Partners:
K4AED1_SETIT
Membrin; Involved in transport of proteins from the cis/medial-Golgi to the trans-Golgi network.
    
 0.931
K3XSA9_SETIT
Uncharacterized protein; Belongs to the synaptobrevin family.
    
 0.930
K4A745_SETIT
Uncharacterized protein; Belongs to the STXBP/unc-18/SEC1 family.
   
 0.923
A0A368QDH0
t-SNARE coiled-coil homology domain-containing protein.
   
 0.919
K3XJG5_SETIT
t-SNARE coiled-coil homology domain-containing protein; Belongs to the syntaxin family.
   
 0.919
K3YK96_SETIT
t-SNARE coiled-coil homology domain-containing protein.
    
 0.876
K3Z1G7_SETIT
t-SNARE coiled-coil homology domain-containing protein.
    
 0.876
K3ZHG7_SETIT
Uncharacterized protein.
    
 0.876
K3XDW2_SETIT
Uncharacterized protein.
   
 0.865
K3Y8T7_SETIT
Syntaxin-18_N domain-containing protein.
   
 0.865
Your Current Organism:
Setaria italica
NCBI taxonomy Id: 4555
Other names: Chaetochloa italica, Chaetochloa italica (L.) Scribn., Panicum italicum, Panicum italicum L., S. italica, Setaria italica (L.) P.Beauv., Setaria viridis subsp. italica, Setaria viridis subsp. italica (L.) Briq., foxtail millet
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