STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
A0A368PVB6Uncharacterized protein. (418 aa)    
Predicted Functional Partners:
A0A368RPP7
Uncharacterized protein.
      
 0.692
K3ZW01_SETIT
Uncharacterized protein.
      
 0.692
K4AEP2_SETIT
Uncharacterized protein.
      
 0.670
K3ZX34_SETIT
Uncharacterized protein.
      
 0.652
K3YI00_SETIT
Uncharacterized protein.
      
 0.648
A0A368QB33
Uncharacterized protein.
      
 0.471
A0A368SQZ6
Uncharacterized protein.
      
 0.471
K3XZW2_SETIT
Uncharacterized protein.
      
 0.423
K3ZK91_SETIT
Uncharacterized protein.
      
 0.423
K4AG30_SETIT
Uncharacterized protein.
      
 0.423
Your Current Organism:
Setaria italica
NCBI taxonomy Id: 4555
Other names: Chaetochloa italica, Chaetochloa italica (L.) Scribn., Panicum italicum, Panicum italicum L., S. italica, Setaria italica (L.) P.Beauv., Setaria viridis subsp. italica, Setaria viridis subsp. italica (L.) Briq., foxtail millet
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.