STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A368PVC8Uncharacterized protein. (442 aa)    
Predicted Functional Partners:
K4A6N6_SETIT
NAC domain-containing protein.
  
     0.506
K3ZT03_SETIT
Uncharacterized protein.
  
     0.484
K3Z5V6_SETIT
Uncharacterized protein.
  
     0.473
K4A621_SETIT
GTD-binding domain-containing protein.
  
     0.468
K4A4S6_SETIT
Uncharacterized protein.
  
     0.466
K3YVK4_SETIT
RPOL4c domain-containing protein.
  
     0.461
K3XRQ4_SETIT
Auxin response factor; Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5'-TGTCTC-3' found in the auxin-responsive promoter elements (AuxREs).
  
     0.459
K4A120_SETIT
Uncharacterized protein.
  
     0.459
K3YRA1_SETIT
Uncharacterized protein.
  
   
 0.455
K4A7G6_SETIT
Uncharacterized protein.
  
 
   0.454
Your Current Organism:
Setaria italica
NCBI taxonomy Id: 4555
Other names: Chaetochloa italica, Chaetochloa italica (L.) Scribn., Panicum italicum, Panicum italicum L., S. italica, Setaria italica (L.) P.Beauv., Setaria viridis subsp. italica, Setaria viridis subsp. italica (L.) Briq., foxtail millet
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.