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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A368PWM4DUF569 domain-containing protein. (343 aa)    
Predicted Functional Partners:
K3ZR20_SETIT
Uncharacterized protein.
  
 
  0.511
A0A368SQD2
Uncharacterized protein.
  
 
  0.509
K4ABB3_SETIT
Uncharacterized protein.
  
  
  0.503
K4A0T1_SETIT
Uncharacterized protein.
  
     0.498
A0A368RU15
Uncharacterized protein.
  
     0.497
K3YLM9_SETIT
Uncharacterized protein.
  
  
  0.497
K3Z3N9_SETIT
Auxin response factor; Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5'-TGTCTC-3' found in the auxin-responsive promoter elements (AuxREs).
  
 
  0.496
K3Z840_SETIT
NAC domain-containing protein.
  
 
  0.495
K3ZDT8_SETIT
Uncharacterized protein.
  
     0.494
A0A368QKP0
Uncharacterized protein.
  
     0.492
Your Current Organism:
Setaria italica
NCBI taxonomy Id: 4555
Other names: Chaetochloa italica, Chaetochloa italica (L.) Scribn., Panicum italicum, Panicum italicum L., S. italica, Setaria italica (L.) P.Beauv., Setaria viridis subsp. italica, Setaria viridis subsp. italica (L.) Briq., foxtail millet
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.