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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A368PZP0Uncharacterized protein. (330 aa)    
Predicted Functional Partners:
K4AA17_SETIT
Uncharacterized protein; Belongs to the actin family.
    
 0.762
A0A368R2A4
Uncharacterized protein.
    
 0.699
K3YSC4_SETIT
Uncharacterized protein.
   
 
 0.660
K3YSB8_SETIT
BAF250_C domain-containing protein.
    
 0.610
K3Z903_SETIT
Uncharacterized protein.
    
 0.581
K4A7U7_SETIT
Uncharacterized protein.
    
 0.581
K3Y6E8_SETIT
SWIB domain-containing protein.
    
 0.571
K3YRG9_SETIT
SWIB domain-containing protein.
    
 0.571
A0A368RE13
Uncharacterized protein.
    
 0.434
A0A368S244
Uncharacterized protein.
    
 0.434
Your Current Organism:
Setaria italica
NCBI taxonomy Id: 4555
Other names: Chaetochloa italica, Chaetochloa italica (L.) Scribn., Panicum italicum, Panicum italicum L., S. italica, Setaria italica (L.) P.Beauv., Setaria viridis subsp. italica, Setaria viridis subsp. italica (L.) Briq., foxtail millet
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.