Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
A0A368QFJ2Protein kinase domain-containing protein; Belongs to the protein kinase superfamily. (478 aa)    
Predicted Functional Partners:
A0A0Q3RMY3
NTF2 domain-containing protein.
    
 0.853
A0A368PQY3
Uncharacterized protein.
    
 0.853
K3YRL0_SETIT
Uncharacterized protein.
    
 0.853
A0A0Q3VW09
Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.
  
 
0.821
A0A368RNQ3
Uncharacterized protein.
    
 0.816
K3YN40_SETIT
Uncharacterized protein.
    
 0.816
K3ZVF8_SETIT
Uncharacterized protein.
    
 0.739
A0A368R7Z0
MADS-box domain-containing protein.
    
 0.593
K3XPN8_SETIT
MADS-box domain-containing protein.
    
 0.593
K3YGN4_SETIT
MHD domain-containing protein; Belongs to the adaptor complexes medium subunit family.
    
 
 0.503
Your Current Organism:
Setaria italica
NCBI taxonomy Id: 4555
Other names: Chaetochloa italica, Chaetochloa italica (L.) Scribn., Panicum italicum, Panicum italicum L., S. italica, Setaria italica (L.) P.Beauv., Setaria viridis subsp. italica, Setaria viridis subsp. italica (L.) Briq., foxtail millet
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