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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A368QL70SAM-dependent MTase DRM-type domain-containing protein. (99 aa)    
Predicted Functional Partners:
K4ABA4_SETIT
WD_REPEATS_REGION domain-containing protein.
    
  0.611
K3XEN7_SETIT
Uncharacterized protein.
  
 
 0.602
K4A2E0_SETIT
Phytocyanin domain-containing protein.
  
 
 0.584
K3YMM4_SETIT
Phytocyanin domain-containing protein.
  
 
 0.578
A0A368QE51
NAC domain-containing protein.
  
 
  0.572
K3ZE96_SETIT
NAC domain-containing protein.
  
 
  0.572
A0A368QGQ5
LRRNT_2 domain-containing protein.
  
 
  0.567
A0A0Q3V940
NAC domain-containing protein.
  
 
  0.564
A0A368Q1X6
PEROXIDASE_4 domain-containing protein; Belongs to the peroxidase family.
  
 
  0.563
A0A368QB45
Phytocyanin domain-containing protein.
  
 
 0.563
Your Current Organism:
Setaria italica
NCBI taxonomy Id: 4555
Other names: Chaetochloa italica, Chaetochloa italica (L.) Scribn., Panicum italicum, Panicum italicum L., S. italica, Setaria italica (L.) P.Beauv., Setaria viridis subsp. italica, Setaria viridis subsp. italica (L.) Briq., foxtail millet
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