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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A368QL71Coilin_N domain-containing protein. (676 aa)    
Predicted Functional Partners:
K3Z4U4_SETIT
Uncharacterized protein.
      
 0.512
K3YPC2_SETIT
TOG domain-containing protein.
      
 0.465
K4ABX6_SETIT
Remorin_C domain-containing protein.
  
     0.433
A0A368SLJ5
Remorin_C domain-containing protein.
  
     0.432
K3XJA8_SETIT
Uncharacterized protein.
  
   0.430
K4A583_SETIT
Uncharacterized protein.
  
     0.419
A0A368QWE8
Uncharacterized protein.
  
 
   0.418
K3XLR6_SETIT
Uncharacterized protein; Belongs to the eukaryotic initiation factor 4E family.
      
 0.414
K3YHQ4_SETIT
Pyr_redox_2 domain-containing protein.
   
  
 0.413
K3ZTF1_SETIT
Pyr_redox_2 domain-containing protein.
   
  
 0.413
Your Current Organism:
Setaria italica
NCBI taxonomy Id: 4555
Other names: Chaetochloa italica, Chaetochloa italica (L.) Scribn., Panicum italicum, Panicum italicum L., S. italica, Setaria italica (L.) P.Beauv., Setaria viridis subsp. italica, Setaria viridis subsp. italica (L.) Briq., foxtail millet
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.