Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Co-occurrence
Co-expression
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[Homology]
Score
A0A368QL71Coilin_N domain-containing protein. (676 aa)    
Predicted Functional Partners:
K3YPC2_SETIT
TOG domain-containing protein.
      
 0.654
K3Z4U4_SETIT
Uncharacterized protein.
    
 
 0.652
K3XK89_SETIT
Uncharacterized protein.
      
 0.572
K3XFN6_SETIT
Rhodanese domain-containing protein.
  
   
 0.568
K3XLR6_SETIT
Uncharacterized protein; Belongs to the eukaryotic initiation factor 4E family.
      
 0.568
K3YHQ4_SETIT
Pyr_redox_2 domain-containing protein.
   
  
 0.559
K3ZTF1_SETIT
Pyr_redox_2 domain-containing protein.
   
  
 0.559
A0A368SDR5
Histidinol dehydrogenase, chloroplastic; Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine.
     
 0.549
K4A800_SETIT
Uncharacterized protein; Belongs to the histidinol dehydrogenase family.
     
 0.549
K3YUE0_SETIT
Uncharacterized protein.
      
 0.543
Your Current Organism:
Setaria italica
NCBI taxonomy Id: 4555
Other names: Chaetochloa italica, Chaetochloa italica (L.) Scribn., Panicum italicum, Panicum italicum L., S. italica, Setaria italica (L.) P.Beauv., Setaria viridis subsp. italica, Setaria viridis subsp. italica (L.) Briq., foxtail millet
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