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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A368QRA4Uncharacterized protein; Belongs to the synaptobrevin family. (221 aa)    
Predicted Functional Partners:
K3YXV8_SETIT
Uncharacterized protein; Belongs to the synaptobrevin family.
  
  
 
0.900
A0A368QKD5
Uncharacterized protein; Belongs to the STXBP/unc-18/SEC1 family.
  
 
 
 0.743
A0A368RRA5
Uncharacterized protein; Belongs to the STXBP/unc-18/SEC1 family.
  
 
 
 0.743
K3Y605_SETIT
Uncharacterized protein; Belongs to the STXBP/unc-18/SEC1 family.
  
 
 
 0.742
A0A368R986
Uncharacterized protein.
    
 
 0.623
K3XEE6_SETIT
Protein VACUOLELESS1; Required for vacuole biogenesis and vacuole enlargment in dividing and expanding cells. Involved in the docking or fusion of prevacuolar vesicles; Belongs to the VPS16 family.
    
 
 0.623
A0A368Q811
Uncharacterized protein.
    
 0.609
K3YUN3_SETIT
t-SNARE coiled-coil homology domain-containing protein.
    
 0.609
K3YV27_SETIT
t-SNARE coiled-coil homology domain-containing protein.
    
 0.609
K3ZUC4_SETIT
Uncharacterized protein.
    
 0.609
Your Current Organism:
Setaria italica
NCBI taxonomy Id: 4555
Other names: Chaetochloa italica, Chaetochloa italica (L.) Scribn., Panicum italicum, Panicum italicum L., S. italica, Setaria italica (L.) P.Beauv., Setaria viridis subsp. italica, Setaria viridis subsp. italica (L.) Briq., foxtail millet
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.