STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A368RUT9Photolyase/cryptochrome alpha/beta domain-containing protein. (683 aa)    
Predicted Functional Partners:
K3YQG4_SETIT
Uncharacterized protein.
    
 0.966
K3Z3A9_SETIT
Uncharacterized protein.
    
 0.936
K3XEX5_SETIT
Uncharacterized protein.
     
 0.931
K3Z440_SETIT
Uncharacterized protein.
     
 0.931
K3XVT1_SETIT
Photolyase/cryptochrome alpha/beta domain-containing protein.
  
 
0.915
A0A368PKC7
WD_REPEATS_REGION domain-containing protein.
     
 0.908
A0A368PN78
Photolyase/cryptochrome alpha/beta domain-containing protein.
  
  
 
0.901
A0A368R837
Uncharacterized protein.
   
 0.857
A0A368QES4
Uncharacterized protein.
    
 0.699
K3Z398_SETIT
Uncharacterized protein.
    
 0.699
Your Current Organism:
Setaria italica
NCBI taxonomy Id: 4555
Other names: Chaetochloa italica, Chaetochloa italica (L.) Scribn., Panicum italicum, Panicum italicum L., S. italica, Setaria italica (L.) P.Beauv., Setaria viridis subsp. italica, Setaria viridis subsp. italica (L.) Briq., foxtail millet
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.