Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
A0A368S692Uncharacterized protein. (909 aa)    
Predicted Functional Partners:
K3XI75_SETIT
Uncharacterized protein.
  
   
 0.618
K3ZLI5_SETIT
GUN4 domain-containing protein.
      
 0.616
K3Z106_SETIT
LRRNT_2 domain-containing protein.
    
 0.540
K3Z5B2_SETIT
Telomerase reverse transcriptase; Telomerase is a ribonucleoprotein enzyme essential for the replication of chromosome termini in most eukaryotes. It elongates telomeres. It is a reverse transcriptase that adds simple sequence repeats to chromosome ends by copying a template sequence within the RNA component of the enzyme.
    
 
 0.525
K3XLX7_SETIT
Homeobox domain-containing protein.
      
 0.516
K3YE45_SETIT
Uncharacterized protein; Belongs to the peptidase S8 family.
      
 0.513
K3ZCE4_SETIT
Homeobox domain-containing protein.
      
 0.513
A0A368SS03
Calpain catalytic domain-containing protein; Belongs to the peptidase C2 family.
   
  
 0.510
K4A4N5_SETIT
Calpain catalytic domain-containing protein; Belongs to the peptidase C2 family.
   
  
 0.510
K3Z5Z2_SETIT
Telomerase reverse transcriptase; Telomerase is a ribonucleoprotein enzyme essential for the replication of chromosome termini in most eukaryotes. It elongates telomeres. It is a reverse transcriptase that adds simple sequence repeats to chromosome ends by copying a template sequence within the RNA component of the enzyme.
    
 
 0.502
Your Current Organism:
Setaria italica
NCBI taxonomy Id: 4555
Other names: Chaetochloa italica, Chaetochloa italica (L.) Scribn., Panicum italicum, Panicum italicum L., S. italica, Setaria italica (L.) P.Beauv., Setaria viridis subsp. italica, Setaria viridis subsp. italica (L.) Briq., foxtail millet
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