Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
A0A368SAC9Uncharacterized protein. (1128 aa)    
Predicted Functional Partners:
K3YPH4_SETIT
Uncharacterized protein.
   
  0.832
A0A368PPN3
Uncharacterized protein; Belongs to the membrane-bound acyltransferase family.
     
 0.761
K3YRR7_SETIT
Uncharacterized protein; Belongs to the membrane-bound acyltransferase family.
     
 0.761
K3XEC2_SETIT
PNPLA domain-containing protein.
    
 0.759
K4A5Q5_SETIT
PNPLA domain-containing protein.
    
 0.759
K3XW67_SETIT
Uncharacterized protein.
  
 
 0.751
K3ZUD9_SETIT
PlsC domain-containing protein.
  
 
 0.751
K3Y5W8_SETIT
Glycerol-3-phosphate dehydrogenase; Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family.
  
 0.698
A0A368QYX2
Uncharacterized protein.
  
 
 0.559
A0A368S697
Uncharacterized protein.
  
 
 0.559
Your Current Organism:
Setaria italica
NCBI taxonomy Id: 4555
Other names: Chaetochloa italica, Chaetochloa italica (L.) Scribn., Panicum italicum, Panicum italicum L., S. italica, Setaria italica (L.) P.Beauv., Setaria viridis subsp. italica, Setaria viridis subsp. italica (L.) Briq., foxtail millet
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