Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
A0A368SAJ8LRRNT_2 domain-containing protein. (1164 aa)    
Predicted Functional Partners:
K4AA17_SETIT
Uncharacterized protein; Belongs to the actin family.
    
 0.756
K3YSC4_SETIT
Uncharacterized protein.
   
 
 0.740
A0A368R2A4
Uncharacterized protein.
   
 0.701
K3YSB8_SETIT
BAF250_C domain-containing protein.
    
 0.676
K3Z903_SETIT
Uncharacterized protein.
    
 0.614
K4A7U7_SETIT
Uncharacterized protein.
    
 0.614
K3Y6E8_SETIT
SWIB domain-containing protein.
    
 0.604
K3YRG9_SETIT
SWIB domain-containing protein.
    
 0.604
K3YQQ5_SETIT
Protein arginine N-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily.
    
 0.472
K3ZA65_SETIT
Ubiquitin_4 domain-containing protein.
    
  0.459
Your Current Organism:
Setaria italica
NCBI taxonomy Id: 4555
Other names: Chaetochloa italica, Chaetochloa italica (L.) Scribn., Panicum italicum, Panicum italicum L., S. italica, Setaria italica (L.) P.Beauv., Setaria viridis subsp. italica, Setaria viridis subsp. italica (L.) Briq., foxtail millet
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