STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A368SAY5Uncharacterized protein; Belongs to the disease resistance NB-LRR family. (320 aa)    
Predicted Functional Partners:
A0A368RQC5
Uncharacterized protein.
  
     0.523
K3YNF0_SETIT
Uncharacterized protein.
  
     0.521
A0A368PID6
Uncharacterized protein.
  
     0.518
K4ABP0_SETIT
Phytocyanin domain-containing protein.
  
     0.513
K3YCW3_SETIT
Uncharacterized protein.
  
     0.509
K3ZN09_SETIT
WRKY domain-containing protein.
  
     0.506
A0A368RYZ4
Uncharacterized protein.
  
     0.502
K3YMX3_SETIT
Uncharacterized protein.
  
     0.501
K3YNC7_SETIT
Uncharacterized protein.
  
     0.498
A0A368RQC3
Uncharacterized protein.
  
     0.495
Your Current Organism:
Setaria italica
NCBI taxonomy Id: 4555
Other names: Chaetochloa italica, Chaetochloa italica (L.) Scribn., Panicum italicum, Panicum italicum L., S. italica, Setaria italica (L.) P.Beauv., Setaria viridis subsp. italica, Setaria viridis subsp. italica (L.) Briq., foxtail millet
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.