Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
A0A368SB36Uncharacterized protein. (409 aa)    
Predicted Functional Partners:
A0A368QCX5
BHLH domain-containing protein.
  
     0.514
K3Y359_SETIT
Uncharacterized protein.
  
     0.512
K3XIT5_SETIT
Uncharacterized protein.
  
     0.507
A0A368PUP7
NB-ARC domain-containing protein; Belongs to the disease resistance NB-LRR family.
  
     0.501
A0A368RIX5
F-box domain-containing protein.
  
  
  0.499
A0A368PPB3
Uncharacterized protein.
  
     0.497
A0A368S8R7
DUF295 domain-containing protein.
  
  
  0.497
K3ZL41_SETIT
NB-ARC domain-containing protein; Belongs to the disease resistance NB-LRR family.
  
     0.495
A0A368S8L5
Uncharacterized protein; Belongs to the disease resistance NB-LRR family.
  
     0.493
A0A368S5P3
Uncharacterized protein.
  
     0.492
Your Current Organism:
Setaria italica
NCBI taxonomy Id: 4555
Other names: Chaetochloa italica, Chaetochloa italica (L.) Scribn., Panicum italicum, Panicum italicum L., S. italica, Setaria italica (L.) P.Beauv., Setaria viridis subsp. italica, Setaria viridis subsp. italica (L.) Briq., foxtail millet
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