STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A368SWL9Protein kinase domain-containing protein. (620 aa)    
Predicted Functional Partners:
K3YPA0_SETIT
Uncharacterized protein.
    
 0.979
K3YPF6_SETIT
ATG11 domain-containing protein.
    
 0.969
K3Z5V2_SETIT
Cysteine protease.
   
 
 0.948
K3XGX5_SETIT
Uncharacterized protein.
    
 0.943
K3XH77_SETIT
Uncharacterized protein.
    
 0.943
K3XUQ8_SETIT
Uncharacterized protein.
   
 
 0.932
A0A368SF17
WD_REPEATS_REGION domain-containing protein.
    
 
 0.930
K3YTJ1_SETIT
Autophagy protein 5; Required for autophagy.
    
 
 0.929
K3YX54_SETIT
Ubiquitin-like protein ATG12; Ubiquitin-like protein involved in cytoplasm to vacuole transport (Cvt) and autophagic vesicle formation. Belongs to the ATG12 family.
    
 
 0.929
K3ZHV3_SETIT
ATG13 domain-containing protein.
   
 0.929
Your Current Organism:
Setaria italica
NCBI taxonomy Id: 4555
Other names: Chaetochloa italica, Chaetochloa italica (L.) Scribn., Panicum italicum, Panicum italicum L., S. italica, Setaria italica (L.) P.Beauv., Setaria viridis subsp. italica, Setaria viridis subsp. italica (L.) Briq., foxtail millet
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.