STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
K3Y236_SETITUncharacterized protein; Belongs to the peptidase C1 family. (351 aa)    
Predicted Functional Partners:
K3ZWL8_SETIT
Uncharacterized protein.
    
  0.907
K3ZUF9_SETIT
OBG-type G domain-containing protein.
    
   0.897
A0A368RMK5
DNA polymerase epsilon subunit; Participates in DNA repair and in chromosomal DNA replication; Belongs to the DNA polymerase epsilon subunit B family.
    
   0.876
K3XIL4_SETIT
OBG-type G domain-containing protein.
    
   0.876
K3YH19_SETIT
DNA polymerase epsilon subunit; Participates in DNA repair and in chromosomal DNA replication; Belongs to the DNA polymerase epsilon subunit B family.
    
   0.876
A0A368PI76
Citrate synthase.
   
   0.858
K3YR77_SETIT
Citrate synthase; Belongs to the citrate synthase family.
   
   0.858
K3YRV8_SETIT
Citrate synthase; Belongs to the citrate synthase family.
   
   0.858
A0A368QAA7
Uncharacterized protein.
    
  0.857
K3ZAG9_SETIT
Uncharacterized protein.
    
  0.857
Your Current Organism:
Setaria italica
NCBI taxonomy Id: 4555
Other names: Chaetochloa italica, Chaetochloa italica (L.) Scribn., Panicum italicum, Panicum italicum L., S. italica, Setaria italica (L.) P.Beauv., Setaria viridis subsp. italica, Setaria viridis subsp. italica (L.) Briq., foxtail millet
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.