STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
K3Z2Q1_SETITUncharacterized protein. (146 aa)    
Predicted Functional Partners:
A0A368R008
LOB domain-containing protein.
  
     0.531
K3XT78_SETIT
LOB domain-containing protein.
  
     0.531
K3ZY94_SETIT
ZF-HD dimerization-type domain-containing protein.
  
     0.520
K3ZC40_SETIT
LOB domain-containing protein.
  
     0.511
A0A368Q169
ZF-HD dimerization-type domain-containing protein.
  
     0.509
K3Y0D4_SETIT
Uncharacterized protein.
  
     0.508
K3XL26_SETIT
LOB domain-containing protein.
  
     0.504
K3Z2F2_SETIT
C2H2-type domain-containing protein.
  
     0.498
K3YGQ8_SETIT
Uncharacterized protein.
  
     0.495
A0A368QWY9
Uncharacterized protein; Belongs to the glycosyltransferase 2 family.
  
     0.491
Your Current Organism:
Setaria italica
NCBI taxonomy Id: 4555
Other names: Chaetochloa italica, Chaetochloa italica (L.) Scribn., Panicum italicum, Panicum italicum L., S. italica, Setaria italica (L.) P.Beauv., Setaria viridis subsp. italica, Setaria viridis subsp. italica (L.) Briq., foxtail millet
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.