STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
K3ZED7_SETITSATase_N domain-containing protein. (320 aa)    
Predicted Functional Partners:
K4A9V0_SETIT
Uncharacterized protein.
   
 0.618
K4A843_SETIT
Adenylosuccinate lyase; Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily.
    
  0.586
K3XIV5_SETIT
Cysteine synthase; Belongs to the cysteine synthase/cystathionine beta- synthase family.
   
 0.548
A0A368QMY9
Uncharacterized protein.
    
 0.539
A0A368S9Z9
Uncharacterized protein.
    
 0.539
K3Z978_SETIT
Uncharacterized protein.
    
 0.539
K3ZIC1_SETIT
Uncharacterized protein.
    
 0.539
K3XXP1_SETIT
NAD(P)-bd_dom domain-containing protein.
  
  
 0.520
K4AAZ0_SETIT
Peroxisome biogenesis protein 12; Required for peroxisome biogenesis and for PTS1- and PTS2- dependent protein import into peroxisomes. Belongs to the pex2/pex10/pex12 family.
    
 0.510
K3XIJ1_SETIT
Cysteine synthase; Belongs to the cysteine synthase/cystathionine beta- synthase family.
   
 0.504
Your Current Organism:
Setaria italica
NCBI taxonomy Id: 4555
Other names: Chaetochloa italica, Chaetochloa italica (L.) Scribn., Panicum italicum, Panicum italicum L., S. italica, Setaria italica (L.) P.Beauv., Setaria viridis subsp. italica, Setaria viridis subsp. italica (L.) Briq., foxtail millet
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