STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
K4A6L3_SETITExo84_C domain-containing protein. (686 aa)    
Predicted Functional Partners:
K3YG03_SETIT
Sec8_exocyst domain-containing protein.
    
 0.970
A0A368PRF3
Uncharacterized protein.
    
 0.946
A0A368QXH6
Uncharacterized protein.
    
 0.946
A0A368RU00
Exocyst complex component SEC5; Component of the exocyst complex involved in the docking of exocytic vesicles with fusion sites on the plasma membrane. Belongs to the SEC5 family.
    
 0.943
K3Y4U0_SETIT
Exocyst complex component SEC5; Component of the exocyst complex involved in the docking of exocytic vesicles with fusion sites on the plasma membrane. Belongs to the SEC5 family.
    
 0.943
A0A368QD01
Uncharacterized protein.
    
 0.923
K4A5L4_SETIT
Sec3-PIP2_bind domain-containing protein.
    
 0.923
A0A368S6A2
Sec3-PIP2_bind domain-containing protein.
    
 0.922
K3ZLJ3_SETIT
Uncharacterized protein.
    
 0.922
A0A0Q3Q743
Uncharacterized protein.
    
 0.884
Your Current Organism:
Setaria italica
NCBI taxonomy Id: 4555
Other names: Chaetochloa italica, Chaetochloa italica (L.) Scribn., Panicum italicum, Panicum italicum L., S. italica, Setaria italica (L.) P.Beauv., Setaria viridis subsp. italica, Setaria viridis subsp. italica (L.) Briq., foxtail millet
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.