STRINGSTRING
Si007019m protein (Setaria italica) - STRING interaction network
"Si007019m" - Uncharacterized protein in Setaria italica
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Si007019mUncharacterized protein (292 aa)    
Predicted Functional Partners:
Si023408m
Uncharacterized protein (179 aa)
           
  0.576
Si002992m
Uncharacterized protein (196 aa)
           
  0.576
Si030591m
Uncharacterized protein (313 aa)
       
 
  0.520
Si029354m
Uncharacterized protein (571 aa)
       
      0.517
Si029725m
Uncharacterized protein (471 aa)
           
  0.497
Si029724m
Uncharacterized protein (471 aa)
           
  0.497
Si026338m
Uncharacterized protein (461 aa)
           
  0.497
Si038653m
Uncharacterized protein (271 aa)
           
  0.456
Si017701m
Uncharacterized protein (343 aa)
           
  0.456
Si013925m
Uncharacterized protein (380 aa)
           
  0.456
Your Current Organism:
Setaria italica
NCBI taxonomy Id: 4555
Other names: Chaetochloa italica, Chaetochloa italica (L.) Scribn., Panicum italicum, Panicum italicum L., S. italica, Setaria italica, Setaria italica (L.) P.Beauv., Setaria viridis subsp. italica, Setaria viridis subsp. italica (L.) Briq., foxtail millet
Server load: low (5%) [HD]