STRINGSTRING
Si036840m protein (Setaria italica) - STRING interaction network
"Si036840m" - Uncharacterized protein in Setaria italica
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Si036840mUncharacterized protein (296 aa)    
Predicted Functional Partners:
Si005787m
DNA-directed RNA polymerase; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (966 aa)
     
        0.863
Si000692m
Uncharacterized protein (620 aa)
     
        0.863
Si036812m
Uncharacterized protein (300 aa)
     
        0.861
Si006856m
Uncharacterized protein (333 aa)
     
        0.859
Si013351m
Uncharacterized protein (692 aa)
     
        0.806
Si021953m
Uncharacterized protein (470 aa)
     
   
  0.760
Si024037m
Uncharacterized protein (455 aa)
     
   
  0.758
Si036973m
Uncharacterized protein (277 aa)
           
  0.758
Si034476m
Uncharacterized protein (703 aa)
           
  0.758
Si031215m
Uncharacterized protein (185 aa)
           
  0.758
Your Current Organism:
Setaria italica
NCBI taxonomy Id: 4555
Other names: Chaetochloa italica, Chaetochloa italica (L.) Scribn., Panicum italicum, Panicum italicum L., S. italica, Setaria italica, Setaria italica (L.) P.Beauv., Setaria viridis subsp. italica, Setaria viridis subsp. italica (L.) Briq., foxtail millet
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