STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A194YLC9OVATE domain-containing protein. (177 aa)    
Predicted Functional Partners:
C5X202_SORBI
Uncharacterized protein.
  
     0.531
A0A194YIK4
Uncharacterized protein.
  
     0.530
C5YEW0_SORBI
Uncharacterized protein.
  
     0.530
C5X780_SORBI
Phytocyanin domain-containing protein.
  
     0.528
A0A1B6Q2Q7
NAC domain-containing protein.
  
     0.527
C5X7X2_SORBI
Uncharacterized protein.
  
     0.525
C5Z8L9_SORBI
Uncharacterized protein.
  
     0.524
C5XD31_SORBI
GRAS domain-containing protein; Belongs to the GRAS family.
  
     0.523
C5Y9H6_SORBI
Uncharacterized protein.
  
     0.523
C5X7X1_SORBI
Uncharacterized protein.
  
     0.522
Your Current Organism:
Sorghum bicolor
NCBI taxonomy Id: 4558
Other names: Andropogon sorghum, Andropogon sorghum (L.) Brot., S. bicolor, Sorghum bicolor (L.) Moench, Sorghum bicolor subsp. bicolor, Sorghum nervosum, Sorghum nervosum Besser ex Schult., Sorghum saccharatum, Sorghum saccharatum (L.) Moench, Sorghum vulgare, Sorghum vulgare Pers., broomcorn, milo, sorghum
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