STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A194YLS2Uncharacterized protein. (428 aa)    
Predicted Functional Partners:
C5XJF6_SORBI
NAB domain-containing protein.
  
  
  0.546
A0A1B6P973
NAB domain-containing protein.
  
  
  0.545
C5XP22_SORBI
NAB domain-containing protein.
  
  
  0.545
C5XFT6_SORBI
Uncharacterized protein.
  
     0.532
C5Z8M7_SORBI
Uncharacterized protein.
  
 
  0.530
A0A1Z5RD34
Uncharacterized protein.
  
     0.526
C5XQP4_SORBI
PB1 domain-containing protein.
  
   
 0.522
C5X2F3_SORBI
Uncharacterized protein.
  
     0.521
SB45I19.7
Uncharacterized protein SB45I19.7.
  
     0.519
C5Z7U6_SORBI
Uncharacterized protein.
  
 0.515
Your Current Organism:
Sorghum bicolor
NCBI taxonomy Id: 4558
Other names: Andropogon sorghum, Andropogon sorghum (L.) Brot., S. bicolor, Sorghum bicolor (L.) Moench, Sorghum bicolor subsp. bicolor, Sorghum nervosum, Sorghum nervosum Besser ex Schult., Sorghum saccharatum, Sorghum saccharatum (L.) Moench, Sorghum vulgare, Sorghum vulgare Pers., broomcorn, milo, sorghum
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.