STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A194YNE8Uncharacterized protein. (525 aa)    
Predicted Functional Partners:
A0A1W0VXJ9
Uncharacterized protein.
   
 
 0.728
A0A1Z5RIU6
Uncharacterized protein.
   
 
 0.728
C5YPE6_SORBI
Uncharacterized protein.
   
 
 0.728
A0A1B6P9G9
Uncharacterized protein.
   
 
 0.689
A0A1B6PHW6
Uncharacterized protein.
   
 
 0.689
A0A1B6QCR8
Uncharacterized protein.
   
 
 0.689
A0A1Z5S8L5
FAD-binding FR-type domain-containing protein.
   
 
 0.689
C5XJ45_SORBI
Uncharacterized protein.
   
 
 0.689
A0A1Z5SA56
Uncharacterized protein.
   
 0.630
C5XUN0_SORBI
Mitogen-activated protein kinase; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. MAP kinase subfamily.
  
 
0.516
Your Current Organism:
Sorghum bicolor
NCBI taxonomy Id: 4558
Other names: Andropogon sorghum, Andropogon sorghum (L.) Brot., S. bicolor, Sorghum bicolor (L.) Moench, Sorghum bicolor subsp. bicolor, Sorghum nervosum, Sorghum nervosum Besser ex Schult., Sorghum saccharatum, Sorghum saccharatum (L.) Moench, Sorghum vulgare, Sorghum vulgare Pers., broomcorn, milo, sorghum
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