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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A194YNT5AP2/ERF domain-containing protein. (255 aa)    
Predicted Functional Partners:
C5Y2M8_SORBI
Dof-type domain-containing protein.
  
     0.511
A0A1B6Q141
Dof-type domain-containing protein.
  
     0.509
A0A1B6PBQ5
AP2/ERF domain-containing protein.
  
     0.502
A0A1W0VRF3
Uncharacterized protein.
  
     0.488
C5YPQ7_SORBI
Dof-type domain-containing protein.
  
     0.487
A0A1W0VZI2
Uncharacterized protein.
  
     0.484
A0A1Z5R3D7
Dof-type domain-containing protein.
  
     0.482
C5X0D7_SORBI
AP2/ERF domain-containing protein.
  
     0.467
A0A1B6Q662
Dof-type domain-containing protein.
  
     0.459
C5XDI6_SORBI
Uncharacterized protein.
  
   
 0.454
Your Current Organism:
Sorghum bicolor
NCBI taxonomy Id: 4558
Other names: Andropogon sorghum, Andropogon sorghum (L.) Brot., S. bicolor, Sorghum bicolor (L.) Moench, Sorghum bicolor subsp. bicolor, Sorghum nervosum, Sorghum nervosum Besser ex Schult., Sorghum saccharatum, Sorghum saccharatum (L.) Moench, Sorghum vulgare, Sorghum vulgare Pers., broomcorn, milo, sorghum
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.