Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
A0A194YNT5AP2/ERF domain-containing protein. (255 aa)    
Predicted Functional Partners:
A0A1B6Q6N9
Uncharacterized protein.
  
   
 0.591
A0A1B6QCJ1
WRKY domain-containing protein.
      
 0.570
C5XCU5_SORBI
WRKY domain-containing protein.
      
 0.570
C5XDI6_SORBI
Uncharacterized protein.
  
   
 0.568
C5XHZ1_SORBI
Auxin-responsive protein; Aux/IAA proteins are short-lived transcriptional factors that function as repressors of early auxin response genes at low auxin concentrations.
      
 0.568
C5WV31_SORBI
Uncharacterized protein.
  
   
 0.557
C5Z2W8_SORBI
AP2/ERF domain-containing protein.
  
   
 0.547
A0A1W0W071
Expansin; Causes loosening and extension of plant cell walls by disrupting non-covalent bonding between cellulose microfibrils and matrix glucans. No enzymatic activity has been found. Belongs to the expansin family. Expansin A subfamily.
  
   
 0.525
A0A1B6Q5V3
Uncharacterized protein; Belongs to the peptidase S8 family.
      
 0.524
A0A1B6QNG8
Thioredoxin domain-containing protein.
      
 0.524
Your Current Organism:
Sorghum bicolor
NCBI taxonomy Id: 4558
Other names: Andropogon sorghum, Andropogon sorghum (L.) Brot., S. bicolor, Sorghum bicolor (L.) Moench, Sorghum bicolor subsp. bicolor, Sorghum nervosum, Sorghum nervosum Besser ex Schult., Sorghum saccharatum, Sorghum saccharatum (L.) Moench, Sorghum vulgare, Sorghum vulgare Pers., broomcorn, milo, sorghum
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