STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A194YR08Uncharacterized protein; Belongs to the disease resistance NB-LRR family. (1257 aa)    
Predicted Functional Partners:
A0A1W0VU82
Uncharacterized protein.
  
     0.498
C5WQU8_SORBI
SWIM-type domain-containing protein.
  
     0.490
A0A1Z5RBB7
Uncharacterized protein.
  
     0.468
A0A1Z5RM02
F-box domain-containing protein.
  
     0.447
A0A1Z5S5M8
SWIM-type domain-containing protein.
  
     0.443
A0A1B6QA07
Uncharacterized protein.
  
     0.423
A0A1W0VTH5
Uncharacterized protein.
  
     0.423
C5YTL8_SORBI
Myb_DNA-bind_3 domain-containing protein.
  
     0.418
A0A1W0W377
F-box domain-containing protein.
  
     0.413
C5WX46_SORBI
GTD-binding domain-containing protein.
  
     0.408
Your Current Organism:
Sorghum bicolor
NCBI taxonomy Id: 4558
Other names: Andropogon sorghum, Andropogon sorghum (L.) Brot., S. bicolor, Sorghum bicolor (L.) Moench, Sorghum bicolor subsp. bicolor, Sorghum nervosum, Sorghum nervosum Besser ex Schult., Sorghum saccharatum, Sorghum saccharatum (L.) Moench, Sorghum vulgare, Sorghum vulgare Pers., broomcorn, milo, sorghum
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.