STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A194YRH7Sina domain-containing protein. (102 aa)    
Predicted Functional Partners:
A0A1W0VTR0
Uncharacterized protein; Belongs to the glycosyltransferase 2 family.
  
 
  0.548
A0A1Z5R542
MADS-box domain-containing protein.
  
     0.540
A0A1B6Q1D8
Cellulose synthase; Belongs to the glycosyltransferase 2 family. Plant cellulose synthase subfamily.
  
 
  0.538
A0A1Z5R139
LOB domain-containing protein.
  
     0.538
C5XQR1_SORBI
Uncharacterized protein.
  
     0.537
C5Z153_SORBI
Cellulose synthase; Belongs to the glycosyltransferase 2 family. Plant cellulose synthase subfamily.
  
 
  0.537
C5Y2Z9_SORBI
LOB domain-containing protein.
  
     0.536
C5YYG3_SORBI
Uncharacterized protein.
  
     0.536
A0A1B6P931
Uncharacterized protein.
  
     0.535
A0A1B6QGF4
Uncharacterized protein.
  
     0.535
Your Current Organism:
Sorghum bicolor
NCBI taxonomy Id: 4558
Other names: Andropogon sorghum, Andropogon sorghum (L.) Brot., S. bicolor, Sorghum bicolor (L.) Moench, Sorghum bicolor subsp. bicolor, Sorghum nervosum, Sorghum nervosum Besser ex Schult., Sorghum saccharatum, Sorghum saccharatum (L.) Moench, Sorghum vulgare, Sorghum vulgare Pers., broomcorn, milo, sorghum
Server load: low (10%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.