STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1B6P7D3Uncharacterized protein. (647 aa)    
Predicted Functional Partners:
C5YQN0_SORBI
PMD domain-containing protein.
   
 0.938
C5X6C9_SORBI
Actin-related protein 2; ATP-binding component of the Arp2/3 complex, a multiprotein complex that mediates actin polymerization upon stimulation by nucleation-promoting factor (NPF). The Arp2/3 complex mediates the formation of branched actin networks in the cytoplasm, providing the force for cell motility. Seems to contact the pointed end of the daughter actin filament.
   
 0.604
A0A1B6P7U8
Uncharacterized protein.
   
 
 0.588
A0A1B6P5M1
Uncharacterized protein.
   
 0.553
A0A1B6PBJ7
Uncharacterized protein.
   
 0.553
A0A1B6QIF9
Uncharacterized protein.
   
 0.553
A0A1Z5S9R2
Uncharacterized protein.
   
 0.553
C5WT90_SORBI
Uncharacterized protein.
   
 0.553
C5WTY3_SORBI
Uncharacterized protein.
   
 0.553
C5WW94_SORBI
Uncharacterized protein.
   
 0.553
Your Current Organism:
Sorghum bicolor
NCBI taxonomy Id: 4558
Other names: Andropogon sorghum, Andropogon sorghum (L.) Brot., S. bicolor, Sorghum bicolor (L.) Moench, Sorghum bicolor subsp. bicolor, Sorghum nervosum, Sorghum nervosum Besser ex Schult., Sorghum saccharatum, Sorghum saccharatum (L.) Moench, Sorghum vulgare, Sorghum vulgare Pers., broomcorn, milo, sorghum
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.