STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1B6PAF7Uncharacterized protein; Belongs to the PI3/PI4-kinase family. (582 aa)    
Predicted Functional Partners:
A0A1B6PLL0
Uncharacterized protein.
   
 0.955
C5XWH2_SORBI
Uncharacterized protein.
   
 0.955
A0A194YQZ7
Uncharacterized protein.
   
 0.906
A0A1B6QD96
Uncharacterized protein.
    
 0.873
A0A1B6P8W2
HECT domain-containing protein.
   
 0.829
A0A1B6PJR9
Uncharacterized protein.
   
 0.829
C5YZ27_SORBI
HECT domain-containing protein.
   
 0.829
C5WZW1_SORBI
Ribosomal_L18_c domain-containing protein.
   
 0.816
C5Z622_SORBI
Uncharacterized protein.
   
 0.811
C5WP38_SORBI
VWFA domain-containing protein.
   
 0.804
Your Current Organism:
Sorghum bicolor
NCBI taxonomy Id: 4558
Other names: Andropogon sorghum, Andropogon sorghum (L.) Brot., S. bicolor, Sorghum bicolor (L.) Moench, Sorghum bicolor subsp. bicolor, Sorghum nervosum, Sorghum nervosum Besser ex Schult., Sorghum saccharatum, Sorghum saccharatum (L.) Moench, Sorghum vulgare, Sorghum vulgare Pers., broomcorn, milo, sorghum
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.