STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1B6PBY8AAI domain-containing protein. (107 aa)    
Predicted Functional Partners:
C5WP24_SORBI
AAI domain-containing protein.
  
     0.512
C5WST5_SORBI
Uncharacterized protein; Belongs to the mitochondrial carrier (TC 2.A.29) family.
  
     0.476
A0A1B6QDT9
Uncharacterized protein.
  
     0.473
A0A1Z5RAJ7
R3H-assoc domain-containing protein.
  
     0.454
C5XFS6_SORBI
Uncharacterized protein.
  
     0.451
C5XG62_SORBI
Uncharacterized protein.
  
     0.450
A0A1B6PHX9
Uncharacterized protein.
  
     0.448
C5YUF6_SORBI
Uncharacterized protein.
  
 
  0.441
A0A1B6PEK3
Uncharacterized protein.
  
     0.434
C5XL06_SORBI
Uncharacterized protein.
  
     0.432
Your Current Organism:
Sorghum bicolor
NCBI taxonomy Id: 4558
Other names: Andropogon sorghum, Andropogon sorghum (L.) Brot., S. bicolor, Sorghum bicolor (L.) Moench, Sorghum bicolor subsp. bicolor, Sorghum nervosum, Sorghum nervosum Besser ex Schult., Sorghum saccharatum, Sorghum saccharatum (L.) Moench, Sorghum vulgare, Sorghum vulgare Pers., broomcorn, milo, sorghum
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