STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1B6PSN0S-acyltransferase; Belongs to the DHHC palmitoyltransferase family. (551 aa)    
Predicted Functional Partners:
C5X8C2_SORBI
Uncharacterized protein.
  
 
   0.525
C5YT08_SORBI
Uncharacterized protein.
  
 
   0.525
A0A1B6QLP7
Uncharacterized protein.
  
 
   0.522
A0A1B6PBD1
Uncharacterized protein.
  
 
   0.521
A0A1Z5R4G4
Uncharacterized protein.
  
 
   0.521
C5WR99_SORBI
Uncharacterized protein.
  
 
   0.519
A0A1W0W478
Uncharacterized protein.
  
 
   0.510
C5WXZ4_SORBI
ANK_REP_REGION domain-containing protein.
  
 
   0.503
C5XRH8_SORBI
ANK_REP_REGION domain-containing protein.
  
 
   0.473
A0A1Z5RHD8
ANK_REP_REGION domain-containing protein.
  
 
   0.461
Your Current Organism:
Sorghum bicolor
NCBI taxonomy Id: 4558
Other names: Andropogon sorghum, Andropogon sorghum (L.) Brot., S. bicolor, Sorghum bicolor (L.) Moench, Sorghum bicolor subsp. bicolor, Sorghum nervosum, Sorghum nervosum Besser ex Schult., Sorghum saccharatum, Sorghum saccharatum (L.) Moench, Sorghum vulgare, Sorghum vulgare Pers., broomcorn, milo, sorghum
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.