STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1B6Q0R0TF-B3 domain-containing protein. (442 aa)    
Predicted Functional Partners:
A0A1B6PSP2
Uncharacterized protein.
    
 0.531
A0A1W0VSE7
Uncharacterized protein.
    
 0.531
A0A194YH63
DUF295 domain-containing protein.
  
     0.484
A0A1Z5R5Z5
DUF4220 domain-containing protein.
  
 
  0.483
C5WRZ0_SORBI
F-box domain-containing protein.
  
 
  0.481
C5Z6W3_SORBI
F-box domain-containing protein.
  
     0.472
A0A1B6PTB6
NB-ARC domain-containing protein; Belongs to the disease resistance NB-LRR family.
  
     0.463
C5YMZ6_SORBI
F-box domain-containing protein.
  
     0.462
A0A1B6QAV9
F-box domain-containing protein.
  
     0.460
A0A1W0VRD7
DUF295 domain-containing protein.
  
     0.458
Your Current Organism:
Sorghum bicolor
NCBI taxonomy Id: 4558
Other names: Andropogon sorghum, Andropogon sorghum (L.) Brot., S. bicolor, Sorghum bicolor (L.) Moench, Sorghum bicolor subsp. bicolor, Sorghum nervosum, Sorghum nervosum Besser ex Schult., Sorghum saccharatum, Sorghum saccharatum (L.) Moench, Sorghum vulgare, Sorghum vulgare Pers., broomcorn, milo, sorghum
Server load: low (20%) [HD]
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