STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1B6Q2N8Uncharacterized protein. (948 aa)    
Predicted Functional Partners:
C5WZY2_SORBI
Uncharacterized protein.
    
 0.980
C5Y0U1_SORBI
Uncharacterized protein.
   
 0.961
A0A1Z5RLF9
Uncharacterized protein.
    
 0.960
A0A1B6P9I4
Mannosyltransferase.
    
 0.956
A0A1B6Q160
Uncharacterized protein.
    
 0.956
C5XFI1_SORBI
Uncharacterized protein.
   
 0.956
A0A1B6Q5H6
Uncharacterized protein.
   
 0.952
A0A1Z5RPZ0
Uncharacterized protein.
    
 0.813
A0A194YSK6
Uncharacterized protein.
   
 
0.633
C5XMV5_SORBI
GPI mannosyltransferase 2; Mannosyltransferase involved in glycosylphosphatidylinositol- anchor biosynthesis.
   
 
 0.622
Your Current Organism:
Sorghum bicolor
NCBI taxonomy Id: 4558
Other names: Andropogon sorghum, Andropogon sorghum (L.) Brot., S. bicolor, Sorghum bicolor (L.) Moench, Sorghum bicolor subsp. bicolor, Sorghum nervosum, Sorghum nervosum Besser ex Schult., Sorghum saccharatum, Sorghum saccharatum (L.) Moench, Sorghum vulgare, Sorghum vulgare Pers., broomcorn, milo, sorghum
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.