STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1B6Q889Uncharacterized protein. (203 aa)    
Predicted Functional Partners:
C5YF58_SORBI
Uncharacterized protein.
  
     0.508
C5YQ97_SORBI
Uncharacterized protein.
  
     0.475
C5XG50_SORBI
Uncharacterized protein.
  
     0.438
A0A1B6QFJ9
Uncharacterized protein.
  
     0.429
C5Z853_SORBI
Remorin_C domain-containing protein.
  
    0.427
A0A1B6QJN0
Uncharacterized protein.
  
     0.419
C5YK76_SORBI
Uncharacterized protein.
  
     0.417
A0A1B6QJM4
Uncharacterized protein.
  
     0.414
C5XGN2_SORBI
Uncharacterized protein.
  
     0.413
A0A1W0W3T9
Uncharacterized protein.
  
     0.410
Your Current Organism:
Sorghum bicolor
NCBI taxonomy Id: 4558
Other names: Andropogon sorghum, Andropogon sorghum (L.) Brot., S. bicolor, Sorghum bicolor (L.) Moench, Sorghum bicolor subsp. bicolor, Sorghum nervosum, Sorghum nervosum Besser ex Schult., Sorghum saccharatum, Sorghum saccharatum (L.) Moench, Sorghum vulgare, Sorghum vulgare Pers., broomcorn, milo, sorghum
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.