STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1B6QED9Malic enzyme. (622 aa)    
Predicted Functional Partners:
A0A1B6QND7
Uncharacterized protein.
  
 
 0.977
A0A1Z5R9Q9
Malate dehydrogenase.
  
 0.973
A0A1B6PEI8
Uncharacterized protein.
  
 0.969
A0A1B6QHU0
Uncharacterized protein.
  
 0.969
C5X371_SORBI
Uncharacterized protein; Belongs to the LDH/MDH superfamily.
  
 0.969
A0A1B6PLP6
Malate synthase; Belongs to the malate synthase family.
  
 
 0.968
A0A1B6PMH4
Malate dehydrogenase.
  
 0.967
A0A1B6Q515
Uncharacterized protein.
  
 0.967
C5WYF2_SORBI
Malate dehydrogenase.
  
 0.967
C5YW21_SORBI
Malate dehydrogenase.
  
 0.967
Your Current Organism:
Sorghum bicolor
NCBI taxonomy Id: 4558
Other names: Andropogon sorghum, Andropogon sorghum (L.) Brot., S. bicolor, Sorghum bicolor (L.) Moench, Sorghum bicolor subsp. bicolor, Sorghum nervosum, Sorghum nervosum Besser ex Schult., Sorghum saccharatum, Sorghum saccharatum (L.) Moench, Sorghum vulgare, Sorghum vulgare Pers., broomcorn, milo, sorghum
Server load: low (10%) [HD]