STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1B6QFW4Ribosomal_L7Ae domain-containing protein. (196 aa)    
Predicted Functional Partners:
A0A1Z5RAN6
WD_REPEATS_REGION domain-containing protein.
   
 0.993
C5WZS5_SORBI
Nop domain-containing protein.
   
 0.986
C5X4T2_SORBI
Nop domain-containing protein.
   
 0.986
C5WR85_SORBI
WD_REPEATS_REGION domain-containing protein.
   
 0.981
A0A1B6QI85
WD_REPEATS_REGION domain-containing protein.
   
 0.976
A0A194YLE4
Uncharacterized protein.
   
 0.970
C5XW06_SORBI
Uncharacterized protein.
   
 0.970
C5YRJ4_SORBI
WD_REPEATS_REGION domain-containing protein.
   
 0.969
C5Z4F8_SORBI
PINc domain-containing protein.
   
 0.967
C5WV32_SORBI
Uncharacterized protein; Belongs to the universal ribosomal protein uS12 family.
  
 0.963
Your Current Organism:
Sorghum bicolor
NCBI taxonomy Id: 4558
Other names: Andropogon sorghum, Andropogon sorghum (L.) Brot., S. bicolor, Sorghum bicolor (L.) Moench, Sorghum bicolor subsp. bicolor, Sorghum nervosum, Sorghum nervosum Besser ex Schult., Sorghum saccharatum, Sorghum saccharatum (L.) Moench, Sorghum vulgare, Sorghum vulgare Pers., broomcorn, milo, sorghum
Server load: low (10%) [HD]