STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1B6QID4GRAS domain-containing protein; Belongs to the GRAS family. (559 aa)    
Predicted Functional Partners:
C5XZX8_SORBI
Glycosyltransferase family 92 protein; Belongs to the glycosyltransferase 92 family.
  
     0.495
C5Z295_SORBI
Glycosyltransferase family 92 protein; Belongs to the glycosyltransferase 92 family.
  
     0.487
A0A194YKB8
Glycosyltransferase family 92 protein; Belongs to the glycosyltransferase 92 family.
  
     0.470
C5WVF6_SORBI
Uncharacterized protein.
  
     0.452
C5YYN7_SORBI
Uncharacterized protein.
  
     0.404
A0A1B6Q420
Uncharacterized protein.
  
     0.402
Your Current Organism:
Sorghum bicolor
NCBI taxonomy Id: 4558
Other names: Andropogon sorghum, Andropogon sorghum (L.) Brot., S. bicolor, Sorghum bicolor (L.) Moench, Sorghum bicolor subsp. bicolor, Sorghum nervosum, Sorghum nervosum Besser ex Schult., Sorghum saccharatum, Sorghum saccharatum (L.) Moench, Sorghum vulgare, Sorghum vulgare Pers., broomcorn, milo, sorghum
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