STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1B6QIL1Uncharacterized protein; Belongs to the PI3/PI4-kinase family. (1933 aa)    
Predicted Functional Partners:
C5Y1Y5_SORBI
Uncharacterized protein; Belongs to the PI3/PI4-kinase family.
  
 
0.977
C5YFB3_SORBI
CDP-diacylglycerol--inositol 3-phosphatidyltransferase.
     
 0.972
C5Z7Q2_SORBI
CDP-diacylglycerol--inositol 3-phosphatidyltransferase.
     
 0.972
A0A1B6QNV4
SAC domain-containing protein.
    
 0.970
C5XU88_SORBI
SAC domain-containing protein.
    
 0.970
A0A194YM04
Phosphatidylinositol 4-phosphate 5-kinase.
   
 0.953
A0A1B6PAS2
PIPK domain-containing protein.
   
 0.953
A0A1B6QIP0
Phosphatidylinositol 4-phosphate 5-kinase.
   
 0.953
A0A1B6QJY1
Phosphatidylinositol 4-phosphate 5-kinase.
   
 0.953
A0A1Z5RGY7
PIPK domain-containing protein.
   
 0.953
Your Current Organism:
Sorghum bicolor
NCBI taxonomy Id: 4558
Other names: Andropogon sorghum, Andropogon sorghum (L.) Brot., S. bicolor, Sorghum bicolor (L.) Moench, Sorghum bicolor subsp. bicolor, Sorghum nervosum, Sorghum nervosum Besser ex Schult., Sorghum saccharatum, Sorghum saccharatum (L.) Moench, Sorghum vulgare, Sorghum vulgare Pers., broomcorn, milo, sorghum
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