STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1B6QKN81,2-dihydroxy-3-keto-5-methylthiopentene dioxygenase; Catalyzes the formation of formate and 2-keto-4- methylthiobutyrate (KMTB) from 1,2-dihydroxy-3-keto-5-methylthiopentene (DHK-MTPene). (182 aa)    
Predicted Functional Partners:
SORBI_K019300
Probable bifunctional methylthioribulose-1-phosphate dehydratase/enolase-phosphatase E1; In the N-terminal section; belongs to the aldolase class II family. MtnB subfamily.
 
 
 0.997
A0A1W0VWR5
Uncharacterized protein.
 
 
 0.967
A0A1B6PSM5
Aminotran_1_2 domain-containing protein.
  
 
 0.943
A0A1B6Q1A9
Aminotran_1_2 domain-containing protein.
  
 
 0.943
A0A1W0VY74
Aminotran_1_2 domain-containing protein.
  
 
 0.943
A0A1Z5RJK9
Aminotran_1_2 domain-containing protein.
  
 
 0.943
C5X291_SORBI
Aminotran_1_2 domain-containing protein.
  
 
 0.943
C5Y4D8_SORBI
Aminotran_1_2 domain-containing protein.
  
 
 0.943
C5Y4D9_SORBI
Aminotran_1_2 domain-containing protein.
  
 
 0.943
MTND2_SORBI
1,2-dihydroxy-3-keto-5-methylthiopentene dioxygenase homolog 2; Catalyzes the formation of formate and 2-keto-4- methylthiobutyrate (KMTB) from 1,2-dihydroxy-3-keto-5-methylthiopentene (DHK-MTPene); Belongs to the acireductone dioxygenase (ARD) family.
  
  
 
0.902
Your Current Organism:
Sorghum bicolor
NCBI taxonomy Id: 4558
Other names: Andropogon sorghum, Andropogon sorghum (L.) Brot., S. bicolor, Sorghum bicolor (L.) Moench, Sorghum bicolor subsp. bicolor, Sorghum nervosum, Sorghum nervosum Besser ex Schult., Sorghum saccharatum, Sorghum saccharatum (L.) Moench, Sorghum vulgare, Sorghum vulgare Pers., broomcorn, milo, sorghum
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.