STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1B6QNK0Uncharacterized protein. (942 aa)    
Predicted Functional Partners:
C5WZV7_SORBI
Uncharacterized protein.
   
 0.813
C5Y461_SORBI
Uncharacterized protein.
   
 0.813
C5YN75_SORBI
Uncharacterized protein.
   
 0.813
A0A1B6PCY5
Guanylate kinase-like domain-containing protein.
    
 
 0.578
A0A1B6QNI7
Guanylate kinase-like domain-containing protein.
    
 
 0.578
A0A1B6Q9G9
Uncharacterized protein.
    
 
 0.536
C5WR36_SORBI
Uncharacterized protein.
    
 
 0.520
C5XGQ0_SORBI
RNA polymerase III subunit C3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
    
   0.512
A0A1W0VWA0
Uncharacterized protein.
  
 
   0.505
A0A1B6Q9H5
F-box domain-containing protein.
  
  
  0.483
Your Current Organism:
Sorghum bicolor
NCBI taxonomy Id: 4558
Other names: Andropogon sorghum, Andropogon sorghum (L.) Brot., S. bicolor, Sorghum bicolor (L.) Moench, Sorghum bicolor subsp. bicolor, Sorghum nervosum, Sorghum nervosum Besser ex Schult., Sorghum saccharatum, Sorghum saccharatum (L.) Moench, Sorghum vulgare, Sorghum vulgare Pers., broomcorn, milo, sorghum
Server load: low (14%) [HD]