STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1B6QNT6Asparagine synthetase [glutamine-hydrolyzing]. (590 aa)    
Predicted Functional Partners:
A0A194YNT6
Aspartate aminotransferase.
   
 
 0.963
A0A194YSX5
Aminotran_1_2 domain-containing protein.
   
 
 0.963
A0A1B6Q670
Aspartate aminotransferase.
   
 
 0.963
C5Y9E4_SORBI
Uncharacterized protein.
     
 0.952
C5YU02_SORBI
Uncharacterized protein.
   
 0.935
A0A1B6PGM0
Uncharacterized protein; Belongs to the aspartate/ornithine carbamoyltransferase superfamily.
    
 0.933
PURA2
Adenylosuccinate synthetase 2, chloroplastic; Plays an important role in the de novo pathway and in the salvage pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP (By similarity). Belongs to the adenylosuccinate synthetase family.
  
 
 0.931
PURA
Adenylosuccinate synthetase, chloroplastic; Plays an important role in the de novo pathway and in the salvage pathway of purine nucleotide biosynthesis. Catalyzes the first commited step in the biosynthesis of AMP from IMP.
  
 
 0.931
C5Y2Y7_SORBI
Asparagine synthetase [glutamine-hydrolyzing].
  
  
0.903
C5Z846_SORBI
Asparagine synthetase [glutamine-hydrolyzing].
  
  
0.903
Your Current Organism:
Sorghum bicolor
NCBI taxonomy Id: 4558
Other names: Andropogon sorghum, Andropogon sorghum (L.) Brot., S. bicolor, Sorghum bicolor (L.) Moench, Sorghum bicolor subsp. bicolor, Sorghum nervosum, Sorghum nervosum Besser ex Schult., Sorghum saccharatum, Sorghum saccharatum (L.) Moench, Sorghum vulgare, Sorghum vulgare Pers., broomcorn, milo, sorghum
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