STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1B6QP42Uncharacterized protein; Belongs to the heat shock protein 70 family. (550 aa)    
Predicted Functional Partners:
A0A194YRT0
Uncharacterized protein.
  
0.785
C5XQB2_SORBI
J domain-containing protein.
  
 0.716
A0A1B6PIL8
J domain-containing protein.
 
 0.651
C5XFM6_SORBI
J domain-containing protein.
 
 0.647
C5X1R8_SORBI
J domain-containing protein.
 
 0.640
A0A1Z5R505
TPR_REGION domain-containing protein.
  
 0.639
C5XR15_SORBI
TPR_REGION domain-containing protein.
  
 0.639
A0A1B6PCZ0
HATPase_c domain-containing protein.
   
 0.638
C5YJP1_SORBI
HATPase_c domain-containing protein.
   
 0.638
A0A1B6PAU0
Uncharacterized protein.
    
 
 0.626
Your Current Organism:
Sorghum bicolor
NCBI taxonomy Id: 4558
Other names: Andropogon sorghum, Andropogon sorghum (L.) Brot., S. bicolor, Sorghum bicolor (L.) Moench, Sorghum bicolor subsp. bicolor, Sorghum nervosum, Sorghum nervosum Besser ex Schult., Sorghum saccharatum, Sorghum saccharatum (L.) Moench, Sorghum vulgare, Sorghum vulgare Pers., broomcorn, milo, sorghum
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